Publications

September - November, 2011

Akerman, N.H., Price, R.E., Pichler, T. & Amend, J.P. 2011, "Energy sources for chemolithotrophs in an arsenic- and iron-rich shallow-sea hydrothermal system", Geobiology, vol. 9, no. 5, pp. 436-445.

Alavian, K.N., Li, H., Collis, L., Bonanni, L., Zeng, L., Sacchetti, S., Lazrove, E., Nabili, P., Flaherty, B., Graham, M., Chen, Y., Messerli, S.M., Mariggio, M.A., Rahner, C., McNay, E., Shore, G.C., Smith, P.J.S., Hardwick, J.M. & Jonas, E.A. 2011, "Bcl-x(L) regulates metabolic efficiency of neurons through interaction with the mitochondrial F(1)F(0) ATP synthase", Nature Cell Biology, vol. 13, no. 10, pp. 1224-U130.

Atamna-Ismaeel, N., Finkel, O.M., Glaser, F., Sharon, I., Schneider, R., Post, A.F., Spudich, J.L., von Mering, C., Vorholt, J.A., Iluz, D., Béjà, O. & Belkin, S. 2011, "Microbial rhodopsins on leaf surfaces of terrestrial plants", Environmental Microbiology, doi: 10.1111/j.1462-2920.2011.02554.x.

Bijoor, N.S., Pataki, D.E., Rocha, A.V. & Goulden, M.L. 2011, "The application of delta(18)O and delta D for understanding water pools and fluxes in a Typha marsh", Plant Cell and Environment, vol. 34, no. 10, pp. 1761-1775.

Bordenstein, S.R., Brothers, C., Wolfe, G., Bahr, M., Minckley, R.L., Clark, M.E., Wernegreen, J.J., Bordenstein, S.R., Reznikoff, W.S. & Werren, J.H. 2010, "Using the Wolbachia Bacterial Symbiont to Teach Inquiry-Based Science: A High School Laboratory Series", American Biology Teacher, vol. 72, no. 8, pp. 478-483.

Bowen, J.L., Ward, B.B., Morrison, H.G., Hobbie, J.E., Valiela, I., Deegan, L.A. & Sogin, M.L. 2011, "Microbial community composition in sediments resists perturbation by nutrient enrichment", Isme Journal, vol. 5, no. 9, pp. 1540-1548.

Buresch, K.C., Mäthger, L.M., Allen, J.J., Bennice, C., Smith, N., Schram, J., Chiao, C., Chubb, C. & Hanlon, R.T. "The use of background matching vs. masquerade for camouflage in cuttlefish Sepia officinalis", Vision Research, 10.1016/j.visres.2011.09.009.

Chagnaud, B.P., Baker, R. & Bass, A.H. 2011, "Vocalization frequency and duration are coded in separate hindbrain nuclei", Nature Communications, vol. 2, pp. 346.

Chung, E., Genco, M.C., Megrelis, L. & Ruderman, J.V. 2011, "Effects of bisphenol A and triclocarban on brain-specific expression of aromatase in early zebrafish embryos", Proceedings of the National Academy of Sciences, vol. 108, no. 43, pp. 17732-17737.

Crook, R.J., Lewis, T., Hanlon, R.T. & Walters, E.T. 2011, "Peripheral injury induces long-term sensitization of defensive responses to visual and tactile stimuli in the squid Loligo pealeii, Lesueur 1821", The Journal of experimental biology, vol. 214, no. 19, pp. 3173-3185.

Deegan, L.A., Neill, C., Haupert, C.L., Ballester, M.V.R., Krusche, A.V., Victoria, R.L., Thomas, S.M. & de Moor, E. 2011, "Amazon deforestation alters small stream structure, nitrogen biogeochemistry and connectivity to larger rivers", Biogeochemistry, vol. 105, no. 1-3, pp. 53-74.

DeGiorgis, J.A., Cavaliere, K.R. & Burbach, J.P.H. 2011, "Identification of molecular motors in the Woods Hole squid, Loligo pealei: An EST approach", Cytoskeleton, vol 68, no. 10, pp. 566–577.

DiPolo, R. & Beauge, L. 2011, "In dialyzed squid axons oxidative stress inhibits the Na(+)/Ca(2+) exchanger by impairing the Ca(i)(2+)-regulatory site", American Journal of Physiology-Cell Physiology, vol. 301, no. 3, pp. C687-C694.

Felzer, B.S., Cronin, T.W., Melillo, J.M., Kicklighter, D.W., Schlosser, C.A. & Dangal, S.R.S. 2011, "Nitrogen effect on carbon-water coupling in forests, grasslands, and shrublands in the arid western United States", Journal of Geophysical Research-Biogeosciences, vol. 116, pp. G03023.

Gladyshev, E.A. & Arkhipova, I.R. 2011, "A widespread class of reverse transcriptase-related cellular genes", Proceedings of the National Academy of Sciences, doi: 10.1073/pnas.1100266108.

Hayes, D.J., McGuire, A.D., Kicklighter, D.W., Gurney, K.R., Burnside, T.J. & Melillo, J.M. 2011, "Is the northern high-latitude land-based CO(2) sink weakening?", Global Biogeochemical Cycles, vol. 25, pp. GB3018.

LaFountain, J.R., Cohan, C.S. & Oldenbourg, R. 2011, "Functional states of kinetochores revealed by laser microsurgery and fluorescent speckle microscopy", Molecular Biology of the Cell, doi: 10.1091/mbc.E11-06-0494.

Manita, S., Miyazaki, K. & Ross, W.N. 2011, "Synaptically activated Ca2+ waves and NMDA spikes locally suppress voltage-dependent Ca2+ signalling in rat pyramidal cell dendrites", The Journal of Physiology, vol. 589, no. 20, pp. 4903-4920.

Markewitz, D., Lamon,E.Conrad,,III, Bustamante, M.C., Chaves, J., Figueiredo, R.O., Johnson, M.S., Krusche, A., Neill, C. & Silva, J.S.O. 2011, "Discharge-calcium concentration relationships in streams of the Amazon and Cerrado of Brazil: soil or land use controlled", Biogeochemistry, vol. 105, no. 1-3, pp. 19-35.

Melillo, J.M., Butler, S., Johnson, J., Mohan, J., Steudler, P., Lux, H., Burrows, E., Bowles, F., Smith, R., Scott, L., Vario, C., Hill, T., Burton, A., Zhou, Y. & Tang, J. 2011, "Soil warming, carbon–nitrogen interactions, and forest carbon budgets", Proceedings of the National Academy of Sciences, vol. 108, no. 23, pp. 9508-9512.

Messerli, M.A. & Graham, D.M. 2011, "Extracellular Electrical Fields Direct Wound Healing and Regeneration", Biological Bulletin, vol. 221, no. 1, pp. 79-92.

Neill, C., Chaves, J.E., Biggs, T., Deegan, L.A., Elsenbeer, H., Figueiredo, R.O., Germer, S., Johnson, M.S., Lehmann, J., Markewitz, D. & Piccolo, M.C. 2011, "Runoff sources and land cover change in the Amazon: an end-member mixing analysis from small watersheds", Biogeochemistry, vol. 105, no. 1-3, pp. 7-18.

Nelson, C.E., Alldredge, A.L., McCliment, E.A., Amaral-Zettler, L.A. & Carlson, C.A. 2011, "Depleted dissolved organic carbon and distinct bacterial communities in the water column of a rapid-flushing coral reef ecosystem", Isme Journal, vol. 5, no. 8, pp. 1374-1387.

Neu, V., Neill, C. & Krusche, A.V. 2011, "Gaseous and fluvial carbon export from an Amazon forest watershed", Biogeochemistry, vol. 105, no. 1-3, pp. 133-147.

Pollastri, M.P. & Campbell, R.K. 2011, "Target repurposing for neglected diseases", Future Medicinal Chemistry, vol. 3, no. 10, pp. 1307-1315.

Rabbitt, R.D. & Brownell, W.E. 2011, "Efferent modulation of hair cell function", Current Opinion in Otolaryngology & Head and Neck Surgery, vol. 19, no. 5, pp. 376-381.

Rocha, A.V. & Shaver, G.R. 2011, "Postfire energy exchange in arctic tundra: the importance and climatic implications of burn severity", Global Change Biology, vol. 17, no. 9, pp. 2831-2841.

Rodrigues, J.L.M., Serres, M.H. & Tiedje, J.M. 2011, "Large-Scale Comparative Phenotypic and Genomic Analyses Reveal Ecological Preferences of Shewanella Species and Identify Metabolic Pathways Conserved at the Genus Level", Applied and Environmental Microbiology, vol. 77, no. 15, pp. 5352-5360.

Smith, J. & Olds, J.L. 2011, "Models and Mechanisms of Regenerative Biology Across Phylogeny: Introduction to a Virtual Symposium in The Biological Bulletin", Biological Bulletin, vol. 221, no. 1, pp. 3-5.

Smith, J., Morgan, J.R., Zottoli, S.J., Smith, P.J., Buxbaum, J.D. & Bloom, O.E. 2011, "Regeneration in the Era of Functional Genomics and Gene Network Analysis", Biological Bulletin, vol. 221, no. 1, pp. 18-34.

Stewart, R.J., Wollheim, W.M., Gooseff, M.N., Briggs, M.A., Jacobs, J.M., Peterson, B.J. & Hopkinson, C.S. 2011, "Separation of river network-scale nitrogen removal among the main channel and two transient storage compartments", Water Resources Research, vol. 47, pp. W00J10.

Tamm, S.L. 2011, "Regeneration of ciliary comb plates in the ctenophore Mnemiopsis leidyi. i. morphology", Journal of Morphology, doi: 10.1002/jmor.11016.

Tank, S.E., Lesack, L.F.W., Gareis, J.A.L., Osburn, C.L. & Hesslein, R.H. 2011, "Multiple tracers demonstrate distinct sources of dissolved organic matter to lakes of the Mackenzie Delta, western Canadian Arctic", Limnology and Oceanography, vol. 56, no. 4, pp. 1297-1309.

Weaver, L., Ems-McClung, S., Stout, J., LeBlanc, C., Shaw, S., Gardner, M. & Walczak, C. "Kif18A Uses a Microtubule Binding Site in the Tail for Plus-End Localization and Spindle Length Regulation", Current Biology, vol. In Press, Corrected Proof.

Zhou, Y., Tang, J., Melillo, J.M., Butler, S. & Mohan, J.E. 2011, "Root standing crop and chemistry after six years of soil warming in a temperate forest", Tree Physiology, vol. 31, no. 7, pp. 707-717.